Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905149.1_cds_XP_016455335.1_49274
CDS Infomation

[gene=LOC107779415] [db_xref=GeneID:107779415] [protein=polygalacturonase-like] [protein_id=XP_016455335.1] [location=complement(join(175831..176049,176297..176525,177678..177967,178688..179125))] [gbkey=CDS]
Sequence

ATGGATAACCTGATAATATCTTGCATTACTGTCCTCTTATCTTCTATATTTCTGTTCTTG
CAATCAAATGCAACATCAACCTTCAATGTGTTAAGCTTTGGTGCAAAACCAAATGGCCAA
ACTGATGCAACTCAGCCATTTCTGAAGGCATGGGGCGCTGCATGCAGCTCAGTGCAACCA
GCGACCATTTATGTTCCCCGAGGACGTTATCTAATAAAGGCAGCTACATTTAGAGGGCCA
TGTAAAAATAGAATAACTGTAAGGAATGATGGAACCCTTGTGGCTCCATTGGATTATTGG
GCCATTGGCAACTCCGGCTACTGGCTTTTGTTCATTCAGGTCAATGGGATTTCGGTCATC
GGTGGAAATCTTGATGCTAAAGGAGCAGCTTTTTGGGCTTGCCGGAAATCAGGCAATAAT
TGCCCAGTTGGAGCTAGGTCAATAACCTTCAATTGGGCTAATGATGTTGTGATAAGTGGC
TTACTATCAATCAACAGCCAGCTAACACATATTGTGTTCAATAGCTGCAACAACGTGATG
GTTCGAAATGTAAGAATAATAGCCCCCGATCAGAGCCCAAACACCGATGGCATTCATGTT
CAATCATCAACTGGGGTTACTATCATAAATAGTAGAATCAAAACTGGAGATGACTGTATA
TCTATTGGACCTGGCACTAGAAATCTTTGGATGGAGAACATTCTCTGTGGACCTGGACAT
GGTGTTAGCATTGGAAGTCTAGCAAGGAATTATGAAGAAGATGGCGTGCAGAATGTGACA
TTGGTTTACTCGATATTCACAGGATCTGATAATGGGTTAAGAATAAAATCTTGGGCAAGA
TCCAGCACTGGTTTTGTCACCAACATTAATTACCGCAACATAGTCATGAAGTACGTTGAC
AATCCAATCATCATTGATCAGAATTACTGCCCCAACAACCAAGATTGCCCTGGCGAGACT
TCTGGTGTAAAGATTAGTCAAGTAACGTATGAAAATATACAAGGGACGTCAACAACTCCA
GTAGCTATGAAGTTTGACTGCAGTCCCAGCAATCCATGCGAAGGAATCCAGATAAAAGAC
ATAAAGCTCACTCATATGAACAAAAAGGCACAATCTTTTTGCAAGAATGTTCGAGGAAGT
AAAAGAGGAGTCATTTTGCCTGACAGTTGTATATGA

Peptide Sequence

PEP ID

XP_016455335.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MDNLIISCITVLLSSIFLFLQSNATSTFNVLSFGAKPNGQTDATQPFLKAWGAACSSVQP
ATIYVPRGRYLIKAATFRGPCKNRITVRNDGTLVAPLDYWAIGNSGYWLLFIQVNGISVI
GGNLDAKGAAFWACRKSGNNCPVGARSITFNWANDVVISGLLSINSQLTHIVFNSCNNVM
VRNVRIIAPDQSPNTDGIHVQSSTGVTIINSRIKTGDDCISIGPGTRNLWMENILCGPGH
GVSIGSLARNYEEDGVQNVTLVYSIFTGSDNGLRIKSWARSSTGFVTNINYRNIVMKYVD
NPIIIDQNYCPNNQDCPGETSGVKISQVTYENIQGTSTTPVAMKFDCSPSNPCEGIQIKD
IKLTHMNKKAQSFCKNVRGSKRGVILPDSCI

Transcript Sequence

Gene sequence data has not been registered.